Search results for "metabolic potential"

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Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island

2021

AbstractThe genus Methylobacter is considered an important and often dominant group of aerobic methane-oxidizing bacteria in many oxic ecosystems, where members of this genus contribute to the reduction of CH4 emissions. Metagenomic studies of the upper oxic layers of geothermal soils of the Favara Grande, Pantelleria, Italy, revealed the presence of various methane-oxidizing bacteria, and resulted in a near complete metagenome assembled genome (MAG) of an aerobic methanotroph, which was classified as a Methylobacter species. In this study, the Methylobacter sp. B2 MAG was used to investigate its metabolic potential and phylogenetic affiliation. The MAG has a size of 4,086,539 bp, consists …

DNA BacterialMethanotrophMethane monooxygenaseSettore BIO/19 - Microbiologia GeneraleMicrobiologyVolcanic soilSoil03 medical and health scienceschemistry.chemical_compoundRNA Ribosomal 16SBotanyMolecular BiologyEcosystemPhylogenyFormaldehyde dehydrogenase030304 developmental biologyOriginal Paper0303 health sciencesbiologyMethanol dehydrogenase030306 microbiologyChemistryCarbon fixationTetrahydromethanopterinGeneral Medicinebiology.organism_classificationMethanotrophMetabolic potentialMetagenomicsEcological MicrobiologyMethylococcaceaebiology.proteinMethaneBacteriaAntonie van Leeuwenhoek
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Comparative Genomics Analysis of Keratin-Degrading Chryseobacterium Species Reveals Their Keratinolytic Potential for Secondary Metabolite Production

2021

A promising keratin-degrading strain from the genus Chryseobacterium (Chryseobacterium sp. KMC2) was investigated using comparative genomic tools against three publicly available reference genomes to reveal the keratinolytic potential for biosynthesis of valuable secondary metabolites. Genomic features and metabolic potential of four species were compared, showing genomic differences but similar functional categories. Eleven different secondary metabolite gene clusters of interest were mined from the four genomes successfully, including five common ones shared across all genomes. Among the common metabolites, we identified gene clusters involved in biosynthesis of flexirubin-type pigment, m…

Microbiology (medical)SiderophoreGene clustersgene clustersQH301-705.5[SDV]Life Sciences [q-bio]keratinous materialsSecondary metaboliteBiologyMicrobiologyGenome03 medical and health scienceschemistry.chemical_compoundBiosynthesisVirologyGenome mininggenome miningmedicineBiology (General)GeneDegradation pathways030304 developmental biologyComparative genomicsdegradation pathways0303 health sciences030306 microbiologyKeratinous materialsmetabolic potentialCitric acid cycleMetabolic pathwayBiochemistrychemistryMetabolic potentialmedicine.drugMicroorganisms
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